indra_world
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INDRA World
Dockerized INDRA World service
INDRA World Modules Reference
indra_world
Index
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Index
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C
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H
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I
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Q
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Y
A
add_curation_for_project() (indra_world.service.db.manager.DbManager method)
add_dart_record() (indra_world.service.db.manager.DbManager method)
add_entry() (indra_world.ontology.ontology.WorldOntology method)
add_project() (indra_world.service.db.manager.DbManager method)
add_records_for_project() (indra_world.service.db.manager.DbManager method)
add_statements() (indra_world.assemblers.cag.assembler.CAGAssembler method)
(indra_world.assembly.incremental_assembler.IncrementalAssembler method)
add_statements_for_record() (indra_world.service.db.manager.DbManager method)
AddProjectRecords (class in indra_world.service.app)
annotate_evidences() (indra_world.assembly.incremental_assembler.IncrementalAssembler static method)
apply_curations() (indra_world.assembly.incremental_assembler.IncrementalAssembler method)
assemble() (indra_world.service.corpus_manager.CorpusManager method)
AssemblyDelta (class in indra_world.assembly.incremental_assembler)
B
beliefs (indra_world.assembly.incremental_assembler.AssemblyDelta attribute)
build_refinements_graph() (indra_world.assembly.incremental_assembler.IncrementalAssembler static method)
build_relations() (indra_world.ontology.ontology.WorldOntology method)
build_relations_new_format() (indra_world.ontology.ontology.WorldOntology method)
C
cache_record() (indra_world.sources.dart.client.DartClient method)
cache_records() (indra_world.sources.dart.client.DartClient method)
CAG (indra_world.assemblers.cag.assembler.CAGAssembler attribute)
CAGAssembler (class in indra_world.assemblers.cag.assembler)
CompositionalRefinementFilter (class in indra_world.assembly.operations)
(class in indra_world.assembly.refinement)
Corpora (class in indra_world.service.db.schema)
CorpusManager (class in indra_world.service.corpus_manager)
CorpusRecords (class in indra_world.service.db.schema)
create_all() (indra_world.service.db.manager.DbManager method)
Curations (class in indra_world.service.db.schema)
CWMSError
CWMSProcessor (class in indra_world.sources.cwms.processor)
CWMSProcessorCompositional (class in indra_world.sources.cwms.processor)
CwmsProcessText (class in indra_world.service.app)
D
DartClient (class in indra_world.sources.dart.client)
DartRecords (class in indra_world.service.db.schema)
DbManager (class in indra_world.service.db.manager)
deduplicate() (indra_world.assembly.incremental_assembler.IncrementalAssembler method)
doc_id (indra_world.sources.cwms.processor.CWMSProcessor attribute)
download_corpus() (in module indra_world.service.corpus_manager)
download_output() (indra_world.sources.dart.client.DartClient method)
dump_local() (indra_world.service.corpus_manager.CorpusManager method)
dump_s3() (indra_world.service.corpus_manager.CorpusManager method)
dump_yml_str() (indra_world.ontology.ontology.WorldOntology method)
E
EidosProcessJsonld (class in indra_world.service.app)
EidosProcessorCompositional (class in indra_world.sources.eidos.processor)
EidosProcessText (class in indra_world.service.app)
EidosWorldProcessor (class in indra_world.sources.eidos.processor)
event_from_event() (indra_world.sources.cwms.processor.CWMSProcessor method)
event_location_refinement() (in module indra_world.assembly.refinement)
event_location_time_matches() (in module indra_world.assembly.matches)
event_location_time_refinement() (in module indra_world.assembly.refinement)
execute() (indra_world.service.db.manager.DbManager method)
export_to_cytoscapejs() (indra_world.assemblers.cag.assembler.CAGAssembler method)
extend() (indra_world.assembly.operations.CompositionalRefinementFilter method)
(indra_world.assembly.refinement.CompositionalRefinementFilter method)
extract_causal_relations() (indra_world.sources.cwms.processor.CWMSProcessor method)
extract_events() (indra_world.sources.cwms.processor.CWMSProcessor method)
(indra_world.sources.sofia.processor.SofiaExcelProcessor method)
(indra_world.sources.sofia.processor.SofiaJsonProcessor method)
extract_relations() (indra_world.sources.sofia.processor.SofiaExcelProcessor method)
(indra_world.sources.sofia.processor.SofiaJsonProcessor method)
G
generate_jupyter_js() (indra_world.assemblers.cag.assembler.CAGAssembler method)
geo_context_from_ref() (indra_world.sources.eidos.processor.EidosWorldProcessor method)
get() (indra_world.service.app.GetAllRecords method)
(indra_world.service.app.GetProjectCurations method)
(indra_world.service.app.GetProjectRecords method)
(indra_world.service.app.GetProjects method)
get_agent_key() (in module indra_world.assembly.refinement)
get_all_supporting_evidence() (indra_world.assembly.incremental_assembler.IncrementalAssembler method)
get_beliefs() (indra_world.assembly.incremental_assembler.IncrementalAssembler method)
get_compositional_grounding() (indra_world.sources.sofia.processor.SofiaProcessor method)
get_corpus_for_project() (indra_world.service.db.manager.DbManager method)
get_corpus_index() (in module indra_world.service.corpus_manager)
get_curation_effect() (indra_world.assembly.incremental_assembler.IncrementalAssembler method)
get_curations_for_project() (indra_world.service.db.manager.DbManager method)
get_dart_records() (indra_world.service.db.manager.DbManager method)
get_eidos_bayesian_scorer() (in module indra_world.belief)
get_eidos_scorer() (in module indra_world.belief)
get_event() (indra_world.sources.sofia.processor.SofiaProcessor method)
get_event_compositional() (indra_world.sources.sofia.processor.SofiaProcessor method)
get_event_flat() (indra_world.sources.sofia.processor.SofiaProcessor method)
get_expanded_events_influences() (in module indra_world.assembly.operations)
get_full_dart_records() (indra_world.service.db.manager.DbManager method)
get_groundings() (indra_world.sources.eidos.processor.EidosProcessorCompositional method)
(indra_world.sources.eidos.processor.EidosWorldProcessor method)
get_local_storage_path() (indra_world.sources.dart.client.DartClient method)
get_location() (in module indra_world.assembly.matches)
get_location_from_object() (in module indra_world.assembly.matches)
get_meaningful_events() (indra_world.sources.sofia.processor.SofiaProcessor method)
get_ontology() (indra_world.sources.dart.client.DartClient method)
get_ontology_graph() (indra_world.sources.dart.client.DartClient method)
get_output_from_record() (indra_world.sources.dart.client.DartClient method)
get_outputs_from_records() (indra_world.sources.dart.client.DartClient method)
get_projects() (indra_world.service.db.manager.DbManager method)
get_reader_output_records() (indra_world.sources.dart.client.DartClient method)
get_reader_versions() (indra_world.sources.dart.client.DartClient method)
get_record_key() (in module indra_world.sources.dart.api)
get_refinements() (indra_world.assembly.incremental_assembler.IncrementalAssembler method)
get_related() (indra_world.assembly.operations.CompositionalRefinementFilter method)
(indra_world.assembly.refinement.CompositionalRefinementFilter method)
get_relation_events() (indra_world.sources.sofia.processor.SofiaProcessor method)
get_session() (indra_world.service.db.manager.DbManager method)
get_statements() (indra_world.assembly.incremental_assembler.IncrementalAssembler method)
(indra_world.service.db.manager.DbManager method)
get_statements_for_document() (indra_world.service.db.manager.DbManager method)
get_statements_for_record() (indra_world.service.db.manager.DbManager method)
get_statements_for_records() (indra_world.service.db.manager.DbManager method)
get_tenant_for_corpus() (indra_world.service.db.manager.DbManager method)
get_tenant_ontology() (indra_world.sources.dart.client.DartClient method)
get_tenant_ontology_graph() (indra_world.sources.dart.client.DartClient method)
get_time() (in module indra_world.assembly.matches)
get_unique_records() (in module indra_world.sources.dart.api)
GetAllRecords (class in indra_world.service.app)
GetProjectCurations (class in indra_world.service.app)
GetProjectRecords (class in indra_world.service.app)
GetProjects (class in indra_world.service.app)
grounding_dict_to_list() (in module indra_world.sources.eidos.client)
H
has_location() (in module indra_world.assembly.matches)
has_time() (in module indra_world.assembly.matches)
Health (class in indra_world.service.app)
HumeJsonLdProcessor (class in indra_world.sources.hume.processor)
HumeJsonLdProcessorCompositional (class in indra_world.sources.hume.processor)
HumeProcessJsonld (class in indra_world.service.app)
I
IncrementalAssembler (class in indra_world.assembly.incremental_assembler)
indra_world.assemblers
module
indra_world.assemblers.cag
module
indra_world.assemblers.cag.assembler
module
indra_world.assemblers.figaro
module
indra_world.assemblers.figaro.assembler
module
indra_world.assemblers.tsv
module
indra_world.assembly
module
indra_world.assembly.incremental_assembler
module
indra_world.assembly.matches
module
indra_world.assembly.operations
module
indra_world.assembly.preprocess
module
indra_world.assembly.refinement
module
indra_world.assembly.stats
module
indra_world.belief
module
indra_world.ontology
module
indra_world.ontology.ontology
module
indra_world.service.app
module
indra_world.service.controller
module
indra_world.service.corpus_manager
module
indra_world.service.db
module
indra_world.service.db.manager
module
indra_world.service.db.schema
module
indra_world.sources.cwms
module
indra_world.sources.cwms.api
module
indra_world.sources.cwms.processor
module
indra_world.sources.dart
module
indra_world.sources.dart.api
module
indra_world.sources.dart.client
module
indra_world.sources.eidos
module
indra_world.sources.eidos.api
module
indra_world.sources.eidos.client
module
indra_world.sources.eidos.migration_table_processor
module
indra_world.sources.eidos.processor
module
indra_world.sources.hume
module
indra_world.sources.hume.api
module
indra_world.sources.hume.processor
module
indra_world.sources.sofia
module
indra_world.sources.sofia.api
module
indra_world.sources.sofia.processor
module
influence_from_event() (indra_world.sources.cwms.processor.CWMSProcessor method)
influence_from_relation() (indra_world.sources.cwms.processor.CWMSProcessor method)
initialize() (indra_world.assembly.operations.CompositionalRefinementFilter method)
(indra_world.assembly.refinement.CompositionalRefinementFilter method)
(indra_world.ontology.ontology.WorldOntology method)
L
load_eidos_curation_table() (in module indra_world.belief)
load_world_ontology() (in module indra_world.ontology.ontology)
load_yaml_from_path() (in module indra_world.ontology.ontology)
location_matches() (in module indra_world.assembly.matches)
location_matches_compositional() (in module indra_world.assembly.matches)
(in module indra_world.assembly.operations)
location_refinement() (in module indra_world.assembly.refinement)
location_refinement_compositional() (in module indra_world.assembly.operations)
(in module indra_world.assembly.refinement)
location_time_refinement() (in module indra_world.assembly.refinement)
M
make_display_name() (in module indra_world.assembly.operations)
make_display_name_linear() (in module indra_world.assembly.operations)
make_model() (indra_world.assemblers.cag.assembler.CAGAssembler method)
matches_fun (indra_world.assembly.incremental_assembler.AssemblyDelta attribute)
merge_deltas() (in module indra_world.assembly.operations)
methods (indra_world.service.app.AddProjectRecords attribute)
(indra_world.service.app.CwmsProcessText attribute)
(indra_world.service.app.EidosProcessJsonld attribute)
(indra_world.service.app.EidosProcessText attribute)
(indra_world.service.app.GetAllRecords attribute)
(indra_world.service.app.GetProjectCurations attribute)
(indra_world.service.app.GetProjectRecords attribute)
(indra_world.service.app.GetProjects attribute)
(indra_world.service.app.Health attribute)
(indra_world.service.app.HumeProcessJsonld attribute)
(indra_world.service.app.NewProject attribute)
(indra_world.service.app.Notify attribute)
(indra_world.service.app.SofiaProcessJson attribute)
(indra_world.service.app.SubmitCurations attribute)
migration_from_event() (indra_world.sources.cwms.processor.CWMSProcessor method)
module
indra_world.assemblers
indra_world.assemblers.cag
indra_world.assemblers.cag.assembler
indra_world.assemblers.figaro
indra_world.assemblers.figaro.assembler
indra_world.assemblers.tsv
indra_world.assembly
indra_world.assembly.incremental_assembler
indra_world.assembly.matches
indra_world.assembly.operations
indra_world.assembly.preprocess
indra_world.assembly.refinement
indra_world.assembly.stats
indra_world.belief
indra_world.ontology
indra_world.ontology.ontology
indra_world.service.app
indra_world.service.controller
indra_world.service.corpus_manager
indra_world.service.db
indra_world.service.db.manager
indra_world.service.db.schema
indra_world.sources.cwms
indra_world.sources.cwms.api
indra_world.sources.cwms.processor
indra_world.sources.dart
indra_world.sources.dart.api
indra_world.sources.dart.client
indra_world.sources.eidos
indra_world.sources.eidos.api
indra_world.sources.eidos.client
indra_world.sources.eidos.migration_table_processor
indra_world.sources.eidos.processor
indra_world.sources.hume
indra_world.sources.hume.api
indra_world.sources.hume.processor
indra_world.sources.sofia
indra_world.sources.sofia.api
indra_world.sources.sofia.processor
N
new_evidences (indra_world.assembly.incremental_assembler.AssemblyDelta attribute)
new_refinements (indra_world.assembly.incremental_assembler.AssemblyDelta attribute)
new_stmts (indra_world.assembly.incremental_assembler.AssemblyDelta attribute)
NewProject (class in indra_world.service.app)
Notify (class in indra_world.service.app)
O
Ontologies (class in indra_world.service.db.schema)
P
par_to_sec (indra_world.sources.cwms.processor.CWMSProcessor attribute)
paragraphs (indra_world.sources.cwms.processor.CWMSProcessor attribute)
parse_factor_grounding_curation() (in module indra_world.assembly.incremental_assembler)
parse_factor_polarity_curation() (in module indra_world.assembly.incremental_assembler)
post() (indra_world.service.app.AddProjectRecords method)
(indra_world.service.app.CwmsProcessText method)
(indra_world.service.app.EidosProcessJsonld method)
(indra_world.service.app.EidosProcessText method)
(indra_world.service.app.HumeProcessJsonld method)
(indra_world.service.app.NewProject method)
(indra_world.service.app.Notify method)
(indra_world.service.app.SofiaProcessJson method)
(indra_world.service.app.SubmitCurations method)
prepare() (indra_world.service.corpus_manager.CorpusManager method)
PreparedStatements (class in indra_world.service.db.schema)
preprocess_statements() (in module indra_world.assembly.preprocess)
print_record_stats() (in module indra_world.sources.dart.api)
prioritize_records() (in module indra_world.sources.dart.client)
process_ekb() (in module indra_world.sources.cwms.api)
process_ekb_file() (in module indra_world.sources.cwms.api)
process_entities() (indra_world.sources.sofia.processor.SofiaJsonProcessor method)
process_events() (indra_world.sources.sofia.processor.SofiaExcelProcessor method)
(indra_world.sources.sofia.processor.SofiaJsonProcessor method)
process_json() (in module indra_world.sources.eidos.api)
(in module indra_world.sources.sofia.api)
process_json_file() (in module indra_world.sources.eidos.api)
(in module indra_world.sources.sofia.api)
process_json_str() (in module indra_world.sources.eidos.api)
process_jsonld() (in module indra_world.sources.hume.api)
process_jsonld_file() (in module indra_world.sources.hume.api)
process_table() (in module indra_world.sources.sofia.api)
process_text() (in module indra_world.sources.cwms.api)
(in module indra_world.sources.eidos.api)
(in module indra_world.sources.sofia.api)
ProjectRecords (class in indra_world.service.db.schema)
Projects (class in indra_world.service.db.schema)
Q
query() (indra_world.service.db.manager.DbManager method)
R
ref_context_from_geoloc() (in module indra_world.sources.eidos.processor)
refinement_edges (indra_world.assembly.incremental_assembler.IncrementalAssembler attribute)
reground_texts() (in module indra_world.sources.eidos.api)
(in module indra_world.sources.eidos.client)
remove_namespaces() (in module indra_world.assembly.operations)
remove_raw_grounding() (in module indra_world.assembly.operations)
S
sentences (indra_world.sources.cwms.processor.CWMSProcessor attribute)
SofiaExcelProcessor (class in indra_world.sources.sofia.processor)
SofiaJsonProcessor (class in indra_world.sources.sofia.processor)
SofiaProcessJson (class in indra_world.service.app)
SofiaProcessor (class in indra_world.sources.sofia.processor)
sql_query() (indra_world.service.db.manager.DbManager method)
statements (indra_world.assemblers.cag.assembler.CAGAssembler attribute)
(indra_world.sources.cwms.processor.CWMSProcessor attribute)
(indra_world.sources.hume.processor.HumeJsonLdProcessor attribute)
SubmitCurations (class in indra_world.service.app)
T
time_context_from_ref() (indra_world.sources.eidos.processor.EidosWorldProcessor method)
time_context_from_timex() (in module indra_world.sources.eidos.processor)
to_json() (indra_world.assembly.incremental_assembler.AssemblyDelta method)
tree (indra_world.sources.cwms.processor.CWMSProcessor attribute)
(indra_world.sources.hume.processor.HumeJsonLdProcessor attribute)
U
url (indra_world.ontology.ontology.WorldOntology attribute)
W
WorldOntology (class in indra_world.ontology.ontology)
Y
yml (indra_world.ontology.ontology.WorldOntology attribute)
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